# this works as a bash include
#
#COMM test SeqHandle.pl -AnnotLowcplx
#COMM - check on the matter of GFF output
#

# give include precedence to code directory, perl -I would not work!
PERLPATH_SV="$PERLPATH"
export PERLPATH="$dircode"

perl "$dircode"/SeqHandle.pl -AnnotLowcplx=0.85  \
  $dirtest/test_SeqNtRept.fa -OutSeqFmt=GFF  \
| grep -v '\<date\>'  \
| grep -v '\<file:'

export PERLPATH="$PERLPATH_SV"
