# this works as a bash include
#
#COMM output format "prettyhtml"
#COMM SeqLab::SeqFormat, SeqLab::SeqStreamIn, SeqLab::SeqStreamOut, SeqHandle.pl
#COMM requirement:
#COMM - frontend SeqHandle.pl relies on GD version lt 1.20

# give include precedence to code directory, perl -I would not work!
PERLPATH_SV="$PERLPATH"
export PERLPATH="$dircode"

perl $dircode/SeqHandle.pl -outseqfmt=prettyhtml $dirtest/${setstamp}_seq.fa  \
  | head -7 | tail -6

export PERLPATH="$PERLPATH_SV"
